Clinical Trials AI
M

Mendel

San Jose company whose Hypercube platform abstracts and reasons over unstructured patient records for chart review, cohort building, and clinical trial prescreening. Its stated technical differentiator is a hybrid approach pairing large language models with symbolic reasoning over a clinical hypergraph, adopted specifically because the company argues pure language model approaches are inadequate for clinical work given hallucination risk. Every answer is traced back to discrete highlighted evidence in the patient's original record, and the platform is cloud agnostic and can be hosted in the customer's own environment so data never leaves. Subject of prospective evaluation at the University of Pennsylvania comparing AI alone, human alone, and human plus AI trial prescreening workflows.

AI Health Index verifiedJuly 28, 2026
Compare Mendel with other vendors
Founded
2016
Headquarters
San Jose, California, United States
Website
www.mendel.ai
Categories
clinical-trials-ai, clinical-decision-support
Indexed Products
Hypercube Charts, Hypercube Cohort
Assessment

Capability Axes

An AI Health Index grade measures what a buyer can verify from public sources on the date shown. It is not a rating of how good the product is. A vendor can build an excellent system and grade low on an axis because it publishes nothing an outsider can check. How grades read

AI Capability
AA on AI CentralityThe artificial intelligence is the product. Remove the model and there is nothing left to sell.
Vendor Published

Clinical reasoning over unstructured records is the entire product. Hypercube abstracts, structures, and answers questions across pathology reports, genomic data, physician notes, claims, and electronic data capture records, and the company's stated design premise is that generic language models are insufficient for this task. There is no services or data brokerage layer; the platform is sold to operate on the customer's own data.

BB on Autonomy and Oversight ModelThe oversight structure is described and one part is missing, commonly the threshold at which the system stops or what happens after it is wrong.
Peer Reviewed Publication

The assisted workflow is tested; the product's own limits are not published. In the Penn randomized evaluation (Nature Communications, 2026) the AI extracted eligibility elements and research coordinators decided, and the study separated that configuration from the AI working alone, which scored 59.9 percent chart-level accuracy against 76.5 percent with a person deciding.

The study found automation bias: staff followed wrong AI answers on performance status and scored worse than without the AI. What the product may do without a person in routine use, how uncertain answers are routed to a reviewer, and how the automation bias the study found is guarded against are not described in anything readable from outside the company.

AA on Model and Technology TransparencyWhat is under the hood is named: proprietary or adapted foundation models identified, training data characterized, and versioning and update practice published so a buyer knows when the system changed.
Vendor Published

The architectural claim is specific, unusual, and motivated by a stated failure mode: Hypercube pairs large language modeling with symbolic reasoning over a clinical hypergraph, adopted because the company argues pure neural approaches cannot discern clinical nuance and are susceptible to hallucination. This is the same neuro symbolic reasoning that RAAPID applies in risk adjustment.

Critically, every answer is tied to discrete highlighted evidence in the original record, which the company frames as making the algorithm's failure mode immediately visible rather than obscured. Publishing the reason for an architecture choice and building for inspectable failure is a materially higher standard than describing capabilities.

CC on Model Supply Chain DisclosureThe architecture is described and no model provider is named. Naming a hosting provider alone does not lift a record out of this band. Record the host in the note, because it matters for residency and breach scope, and grade on the model layer, which is the question this axis is named for.
Vendor Published

The customer hosted route is backed by two concrete mechanisms rather than assurances, and the other routes are not answered. The platform is cloud agnostic and can be hosted inside the customer's own environment, so an institution can process clinical records without them leaving infrastructure it controls, and a dedicated capability de identifies protected health information from clinical records, which is a control operating on the data rather than a statement about handling it.

Evidence linking helps too, since a system that records which source text produced each answer leaves an audit trail of what it drew on. What is absent is everything about the routes a customer might actually take. No model or model family is named, no foundation model provider is identified, no hosting arrangement is described for the vendor operated option, and no sub processor list is published, so the customer hosted path is bounded by the customer's own perimeter while the alternative paths are undescribed.

Nothing states retention, or whether customer records contribute to model development, which matters for a system whose reasoning layer sits over a clinical hypergraph that presumably improves as it sees more clinical language.

AA on Clinical and Operational EvidencePeer reviewed or independently evaluated performance, prospective and multi site where the claim requires it, with the method available to read. The grade describes the strength of the evidence, not its direction: a rigorous study that found no benefit grades by its design, and the note leads with what it found.
Peer Reviewed Publication

A randomized, peer reviewed evaluation led by an academic center, with modest results that it states plainly. Parikh and colleagues (Nature Communications, 2026; University of Pennsylvania and Emory investigators with seven Mendel staff among 17 authors; registered as NCT06561217, results posted) randomized 355 retrospective charts of patients with non-small cell lung or colorectal cancer to prescreening by research staff alone, staff with Mendel's neurosymbolic abstraction, or the AI alone, against a gold standard set by two to three blinded clinicians on 12 eligibility criteria.

Staff with AI reached 76.5 percent chart-level accuracy against 71.1 percent for staff alone (noninferior and superior); the AI alone reached 59.9 percent. Time per chart did not change (37.4 against 37.8 minutes). Gains were largest for biomarker, staging and response criteria, and automation bias lowered accuracy on performance status. The charts came from one health system and the trial was not powered for efficiency or subgroups. A second Penn study against the EA8191 prostate cancer trial (NCT06561230) is still running.

BB on AI Safety and PHI StewardshipCategorical commitments are published, such as no training on customer data, without the retention schedule behind them.
Vendor Published

Two concrete mechanisms rather than assurances. The platform is cloud agnostic and can be hosted inside the customer's own environment so patient data never leaves, and a dedicated capability de identifies PHI from clinical records. Evidence linking, where each answer traces to highlighted source text, functions as a safety control as well as a transparency one, since an unsupported assertion is visibly unsupported. What is absent is published hallucination rate measurement or formal failure mode documentation.

Regulatory and Compliance
CC on HIPAA and BAA PostureA status is stated but not supported: compliance is claimed, or business associate status stated, without the underlying document, including where the only privacy notice published covers the website rather than the service that handles patients. The mirror case grades here as well: a substantive privacy document that reaches the service, with no statement of business associate status anywhere and no scope position taken. One of the two elements the band above asks for is present, which is a grade below it and not a grade at the floor.
Vendor Published

The company's own pages show an architecture built for regulated data, and they publish no contractual posture.

The product documentation states the platform is cloud agnostic and can be hosted in the customer's own environment so that data never leaves, with vendor hosted options offered as an alternative. Redaction is listed among the platform's stated use cases alongside abstraction, chart review and cohort building. Native availability on a major data cloud means it can operate inside a customer's existing warehouse tenancy.

That matters because it changes which legal question applies. Where the platform runs entirely inside the customer's own environment and no records are disclosed to the vendor, the business associate framework is not engaged in the ordinary way, and the customer's own existing safeguards govern. Where the vendor hosts, it plainly is engaged, and nothing addresses it: no business associate agreement availability statement, no characterization of the company's role, and no identification of which entity would sign. The answer therefore differs by deployment and turns on which configuration is being sold.

A second legal question sits alongside the first and is specific to trial prescreening. Screening records to identify candidates happens before anyone has consented to anything, so the operative instruments are institutional review board approval and an authorization or waiver rather than a business associate agreement. A vendor can be correctly positioned on one and silent on the other. Nothing published says under whose authority the screening runs, who holds the approval, or whether the vendor acts as the institution's agent or on its own account.

CC on Security Certifications and Trust CenterControls are described with an outside check behind them, such as independent penetration testing on a stated cadence, but no attestation against a recognized framework. A certification that tests the software security features rather than the vendor operations, such as federal health IT certification, is an outside check of this kind.
Vendor Published

No SOC 2, ISO 27001, HITRUST or equivalent attestation is published, and there is no trust center.

What the company does publish is architecture rather than assurance, and it is substantive enough to change what the gap means. Its own product documentation states the platform is cloud agnostic and can be hosted in the customer's own environment so that data never leaves, with vendor hosted options offered as an alternative. It is available natively on a major data cloud, meaning it can run inside a customer's existing warehouse tenancy, and it is listed on a major cloud marketplace under a first party seller profile.

That produces two kinds of customer with two different exposures, and the missing attestation does not affect them equally. A customer running the platform inside its own environment has substituted architecture for assurance: nothing transits, so the question narrows to what the software does inside the boundary, what it transmits outbound, what telemetry leaves, and what the vendor can see during support. A customer taking the vendor hosted option has none of that and no attestation either, which is the weaker position by some distance.

The sources disagree on trial environments. The company's own product page states that trial environments use synthetic data, while earlier trade coverage of the same feature described it as using a real world clinical dataset. A demonstration environment is a recognized place for real patient data to end up inside a sales process, and nothing published settles which description is accurate today or what governs the environment either way.

CC on FDA and Regulatory StatusNo device claim is made and the product is scoped accordingly. Most administrative and operational products sit here and are not penalized for it, because this axis grades the appropriateness of the positioning rather than possession of a clearance.
Vendor Published

The product is scoped to chart abstraction, cohort building and trial prescreening, with no device claim made for it. It does not diagnose or direct treatment, and candidates it surfaces are confirmed by a research team. The University of Pennsylvania's registrations of its two studies of the product (NCT06561217 and NCT06561230) record the intervention as neither an FDA-regulated drug nor an FDA-regulated device, which is the study sponsor's statement. Prescreening records before consent is governed by IRB approval and an authorization or waiver, and who holds that at each site is not stated.

BB on AI Governance and Bias DisclosureA governance framework with named process behind it, such as certification to an artificial intelligence management standard, or material written for a customer own review committee to evaluate the product with. A framework covering the vendor whole portfolio counts when its scope reaches this product; what it cannot supply is the product specific evaluation the band above asks for. Published results within the one group where the performance of this product is most at risk also sit here: evaluation on the question this axis asks, short of the comparison across groups the band above requires. A medical device clearance or certification, and the quality system behind it, does not reach this band on its own; it is graded under regulatory status. A regulator reviewed plan governing how the model may change does reach it.
Peer Reviewed Publication

Results are analyzed within clinical groups; demographic results are not yet published. The Penn randomized evaluation (Nature Communications, 2026) analyzed accuracy and efficiency by cancer type (lung against colorectal), chart length, complexity and order, with the per-group figures in its supplement, and reported where the AI helped (biomarker, staging, response) and where automation bias hurt (performance status).

The second Penn study, against the EA8191 prostate cancer trial, states the hypothesis that human plus AI prescreening improves the diversity as well as the efficiency and accuracy of prescreening; it is still running. No governance framework or demographic subgroup results are published.

CC on AI Liability and RecourseMechanisms exist that let someone challenge an output, such as audit trails, source traceability or review before commit, with nothing standing behind the output and no route for the harmed party.
Vendor Published

Answers are meant to be checked against the record; nothing stands behind them. The company describes pairing language models with symbolic reasoning over a clinical hypergraph and tying each answer to highlighted evidence in the source record, and in practice a coordinator confirms eligibility.

An outside error figure exists: in the Penn randomized evaluation (Nature Communications, 2026) the AI alone was 59.9 percent accurate at chart level on 12 eligibility criteria against a blinded clinician gold standard, across 355 charts. The company's website was unreachable on 29 Sep 2026, so whether it cites that result is open. No warranty, indemnity or remediation commitment is known.

Integration and Deployment
BB on EHR and Interoperability DepthNamed systems with read access or one directional writing, or standards support with named deployments behind it.
Vendor Published

Integration is oriented toward the analytics stack rather than the clinical one, and is named specifically: upstream and downstream connectivity with data warehouses including Databricks and Snowflake, and business intelligence tools including Tableau and Qlik. The platform ingests structured and unstructured sources spanning notes, pathology, genomics, claims, and electronic data capture.

Named connectors are a stronger disclosure than asserted interoperability, though direct EHR integration is not enumerated, which fits a product operating on warehoused clinical data rather than at the point of care.

AA on Deployment Model and Data ResidencyDeployment options, residency and tenant isolation are all documented, including where data rests and which processing crosses a border.
Vendor Published

The deployment answer is explicit and puts residency in the customer's hands. The platform is cloud agnostic and can be hosted in the customer's own environment so that data never leaves, with vendor hosting available as an alternative rather than a requirement. For an institution unwilling to move patient records to a vendor cloud, that removes the primary objection outright. Try Me environments with synthetic data are offered for evaluation, which lets a buyer test before exposing real records.

Commercial
CC on Commercial TransparencyNo price is published and the posture is discoverable: a buyer can establish how the product is sold and what drives the cost before contacting the vendor. Most of the index sits here.
Vendor Published

No pricing is published. The company does make a comparative cost argument, that domain specific models can outperform generic large language models at a scalable cost, but no rates, licensing structure, or per record economics are disclosed. Evaluation access through synthetic data environments lowers the cost of assessing fit before committing, which is a partial offset.

BB on Setting and Specialty CoverageCoverage is named with validation behind part of it.
Vendor Published

Broader than trial matching alone. Distinct product configurations address chart review, cohort building and analysis, and trial eligibility mapping against templates that can incorporate prior authorization criteria and NCCN guidelines, serving clinical care, pharmaceutical, and diagnostics customers. Published evaluation work is concentrated in oncology, which is where unstructured record complexity is greatest, but the underlying capability is not disease specific.

Alternatives

Alternatives to Mendel

Vendors in the same categories as Mendel whose graded profiles look most alike, with a line on what each product does.

Similar is not the same, so check that each one does the job you need. No vendor pays for placement.

Washington, DC company whose AI and data platform serves the medical side of life sciences: medical affairs, scientific communications and pharmacovigilance.

Palo Alto company whose clinical trial platform runs electronic outcome assessment, electronic consent, televisit and participant apps for decentralized, hybrid and site based studies, now…

New York clinical trial software company, a Dassault Systemes brand, whose platform is anchored by Rave data capture and used across tens of thousands of trials.

Medical AI company, with offices in Jersey City and Athens, whose Synapsis AI model reads full electronic medical records and answers specific clinical questions from structured and…

Clinical trial platform that embeds patient identification, eSource and data capture inside provider organizations so trials can run in routine care, paired with its own recruitment…

Oncology AI that reads the whole patient chart.

Ordered by how closely the graded profiles match across the fifteen axes, inside the same categories. See how each axis is graded in the methodology.

Comparisons

Compared With

Each comparison carries a written verdict, the buyer conditions that favor each vendor, and a graded side by side. Pairs that cross a category boundary are grouped separately, and their verdicts state where the boundary sits rather than manufacturing a head to head.

Commercial

Pricing

Vendor-published figures are labeled as such. Figures labeled “Estimated” are derived from third-party sources and have not been confirmed by the vendor.

Entry Price Pricing Basis BAA Tier Implementation Source
Contact the vendor
Undisclosed. Enterprise platform licensing with customer hosted or vendor hosted options; no rates published. Not disclosed explicitly, though customer hosted deployment and PHI de identification capability indicate the architecture is built for regulated data. Not disclosed. Integrates with existing data warehouses including Databricks and Snowflake and business intelligence tools including Tableau and Qlik, so implementation follows the customer's analytics stack rather than requiring new infrastructure. Vendor Published

No pricing is published. The company argues domain specific models outperform generic large language models at a scalable cost, which is a comparative cost claim rather than a disclosure. Two practical points matter more than rate cards here: evaluation is possible before commitment through Try Me environments running on synthetic data, and deployment can run inside the customer's own cloud so records never leave, which removes the data movement objection that usually stalls procurement. Buyers should confirm which Hypercube configuration is licensed, since chart review, cohort analysis, and trial eligibility mapping are distinct products.